STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
March2Membrane-associated ring finger (C3HC4) 2. (287 aa)    
Predicted Functional Partners:
Fbxo28
F-box protein 28.
   
    0.864
Cnot2
CCR4-NOT transcription complex, subunit 2.
    
 0.853
Stx6
Syntaxin 6.
    
 
 0.771
Spata5
Spermatogenesis associated 5.
    
 0.689
ENSMSIP00000024040
annotation not available
    
 0.689
ENSMSIP00000037867
annotation not available
    
 0.689
Ufd1
Ubiquitin recognition factor in ER-associated degradation 1.
    
 0.619
ENSMSIP00000008794
annotation not available
    
 0.613
Faf2
Fas associated factor family member 2.
    
 0.613
Faf1
Fas-associated factor 1.
    
 0.613
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.