STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lgi2Leucine-rich repeat LGI family, member 2. (550 aa)    
Predicted Functional Partners:
Adam23
A disintegrin and metallopeptidase domain 23.
     
 0.860
Adam11
A disintegrin and metallopeptidase domain 11.
     
 0.825
Zdbf2
Zinc finger, DBF-type containing 2.
     
 0.711
Tep1
Telomerase associated protein 1.
    
  0.574
Ttc41
Tetratricopeptide repeat domain 41.
    
  0.574
ENSMSIP00000015269
annotation not available
      
 0.530
Cecr2
CECR2, histone acetyl-lysine reader.
    
 0.523
Smoc1
SPARC related modular calcium binding 1.
      
 0.511
Adam28
A disintegrin and metallopeptidase domain 28.
     
 0.505
Mpp7
Membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7).
    
 
 0.471
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.