STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sin3aTranscriptional regulator, SIN3A (yeast). (1274 aa)    
Predicted Functional Partners:
Sap30
Sin3 associated polypeptide.
    
 0.999
Hdac2
Histone deacetylase 2.
   
 0.999
Ncor2
Nuclear receptor co-repressor 2.
   
 0.999
Ncor1
Nuclear receptor co-repressor 1.
   
 0.999
Suds3
Suppressor of defective silencing 3 homolog (S. cerevisiae).
   
 0.998
Mecp2
Methyl CpG binding protein 2.
    
 0.998
ENSMSIP00000001845
annotation not available
   
 0.997
Rbbp7
Retinoblastoma binding protein 7, chromatin remodeling factor.
    
 0.997
ENSMSIP00000029555
annotation not available
   
 0.997
Ing2
Inhibitor of growth family, member 2.
   
 0.997
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.