STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnma5Paraneoplastic antigen family 5. (619 aa)    
Predicted Functional Partners:
Fancm
Fanconi anemia, complementation group M.
    
 0.965
Zfp251
Zinc finger protein 251.
    
 
 0.616
Zbed3
Zinc finger, BED type containing 3.
      
 0.612
Rtl3
Retrotransposon Gag like 3.
      
 0.581
ENSMSIP00000021117
annotation not available
    
 
 0.570
ENSMSIP00000015787
annotation not available
     
 0.568
Ppp1r12a
Protein phosphatase 1, regulatory subunit 12A.
    
 
 0.567
Zfp426
Zinc finger protein 426.
    
 
 0.561
Rassf6
Ras association (RalGDS/AF-6) domain family member 6.
    
 
 0.560
Zik1
Zinc finger protein interacting with K protein 1.
    
 
 0.554
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.