STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lingo1Leucine rich repeat and Ig domain containing 1. (620 aa)    
Predicted Functional Partners:
Ngfr
Nerve growth factor receptor (TNFR superfamily, member 16).
    
 0.995
Tnfrsf19
Tumor necrosis factor receptor superfamily, member 19.
      
 0.990
Rtn4
Reticulon 4.
    
 0.984
Rtn4r
Reticulon 4 receptor.
   
 
0.937
Mag
Myelin-associated glycoprotein.
   
 0.889
Adgrl1
Adhesion G protein-coupled receptor L1.
    
  0.868
Adgrl2
Adhesion G protein-coupled receptor L2.
    
  0.868
Adgrl3
Adhesion G protein-coupled receptor L3.
    
  0.868
Omg
Oligodendrocyte myelin glycoprotein.
     
0.809
Rhoa
Ras homolog family member A.
    
 0.807
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.