STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Atg2bAutophagy related 2B. (2076 aa)    
Predicted Functional Partners:
Wipi2
WD repeat domain, phosphoinositide interacting 2.
    
 0.992
Wipi1
WD repeat domain, phosphoinositide interacting 1.
    
 0.991
Ulk2
Unc-51 like kinase 2.
   
 0.990
Ulk1
Unc-51 like kinase 1.
   
 0.988
ENSMSIP00000009060
annotation not available
    
 
 0.977
Atg2a
Autophagy related 2A.
  
 
0.943
Atg9b
Autophagy related 9B.
   
 0.939
Atg9a
Autophagy related 9A.
   
 0.934
Ulk3
Unc-51-like kinase 3.
   
 0.926
Pdik1l
PDLIM1 interacting kinase 1 like.
   
 0.914
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.