Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
4930539E08Rik | Apaf1 | ENSMSIP00000011376 | ENSMSIP00000028040 | RIKEN cDNA 4930539E08 gene. | Apoptotic peptidase activating factor 1. | 0.775 |
4930539E08Rik | Bad | ENSMSIP00000011376 | ENSMSIP00000035880 | RIKEN cDNA 4930539E08 gene. | BCL2-associated agonist of cell death. | 0.908 |
4930539E08Rik | Becn1 | ENSMSIP00000011376 | ENSMSIP00000007650 | RIKEN cDNA 4930539E08 gene. | Beclin 1, autophagy related. | 0.858 |
4930539E08Rik | Bid | ENSMSIP00000011376 | ENSMSIP00000016309 | RIKEN cDNA 4930539E08 gene. | BH3 interacting domain death agonist. | 0.909 |
4930539E08Rik | Bmf | ENSMSIP00000011376 | ENSMSIP00000014495 | RIKEN cDNA 4930539E08 gene. | BCL2 modifying factor. | 0.596 |
4930539E08Rik | ENSMSIP00000021018 | ENSMSIP00000011376 | ENSMSIP00000021018 | RIKEN cDNA 4930539E08 gene. | annotation not available | 0.876 |
4930539E08Rik | ENSMSIP00000021693 | ENSMSIP00000011376 | ENSMSIP00000021693 | RIKEN cDNA 4930539E08 gene. | annotation not available | 0.907 |
4930539E08Rik | Gm38100 | ENSMSIP00000011376 | ENSMSIP00000025812 | RIKEN cDNA 4930539E08 gene. | Predicted gene, 38100. | 0.858 |
4930539E08Rik | Pink1 | ENSMSIP00000011376 | ENSMSIP00000016028 | RIKEN cDNA 4930539E08 gene. | PTEN induced putative kinase 1. | 0.607 |
4930539E08Rik | Pmaip1 | ENSMSIP00000011376 | ENSMSIP00000024235 | RIKEN cDNA 4930539E08 gene. | Phorbol-12-myristate-13-acetate-induced protein 1. | 0.747 |
Apaf1 | 4930539E08Rik | ENSMSIP00000028040 | ENSMSIP00000011376 | Apoptotic peptidase activating factor 1. | RIKEN cDNA 4930539E08 gene. | 0.775 |
Apaf1 | Bad | ENSMSIP00000028040 | ENSMSIP00000035880 | Apoptotic peptidase activating factor 1. | BCL2-associated agonist of cell death. | 0.445 |
Apaf1 | Becn1 | ENSMSIP00000028040 | ENSMSIP00000007650 | Apoptotic peptidase activating factor 1. | Beclin 1, autophagy related. | 0.441 |
Apaf1 | Bid | ENSMSIP00000028040 | ENSMSIP00000016309 | Apoptotic peptidase activating factor 1. | BH3 interacting domain death agonist. | 0.545 |
Apaf1 | Bmf | ENSMSIP00000028040 | ENSMSIP00000014495 | Apoptotic peptidase activating factor 1. | BCL2 modifying factor. | 0.531 |
Apaf1 | ENSMSIP00000021018 | ENSMSIP00000028040 | ENSMSIP00000021018 | Apoptotic peptidase activating factor 1. | annotation not available | 0.544 |
Apaf1 | ENSMSIP00000021693 | ENSMSIP00000028040 | ENSMSIP00000021693 | Apoptotic peptidase activating factor 1. | annotation not available | 0.704 |
Apaf1 | Pmaip1 | ENSMSIP00000028040 | ENSMSIP00000024235 | Apoptotic peptidase activating factor 1. | Phorbol-12-myristate-13-acetate-induced protein 1. | 0.613 |
Bad | 4930539E08Rik | ENSMSIP00000035880 | ENSMSIP00000011376 | BCL2-associated agonist of cell death. | RIKEN cDNA 4930539E08 gene. | 0.908 |
Bad | Apaf1 | ENSMSIP00000035880 | ENSMSIP00000028040 | BCL2-associated agonist of cell death. | Apoptotic peptidase activating factor 1. | 0.445 |
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