STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kctd20Potassium channel tetramerisation domain containing 20. (419 aa)    
Predicted Functional Partners:
Pnma1
Paraneoplastic antigen MA1.
      
 0.597
Pnma2
Paraneoplastic antigen MA2.
      
 0.594
Ywhab
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide.
    
 
 0.581
Ywhah
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide.
    
 
 0.575
Mtcl1
Microtubule crosslinking factor 1.
      
 0.544
Kctd19
Potassium channel tetramerisation domain containing 19.
      
 0.537
Dock7
Dedicator of cytokinesis 7.
      
 0.529
Fam53b
Family with sequence similarity 53, member B.
      
 0.528
Rundc3b
RUN domain containing 3B.
      
 0.527
Cyfip2
Cytoplasmic FMR1 interacting protein 2.
   
  
 0.525
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.