STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fignl1Fidgetin-like 1. (692 aa)    
Predicted Functional Partners:
Ubxn7
UBX domain protein 7.
   
 0.989
Ist1
Increased sodium tolerance 1 homolog (yeast).
    
 0.938
Exo1
Exonuclease 1.
  
  
 0.930
Chmp3
Charged multivesicular body protein 3.
   
 0.924
Ufd1
Ubiquitin recognition factor in ER-associated degradation 1.
    
 0.920
Ercc6l
Excision repair cross-complementing rodent repair deficiency complementation group 6 like.
   
 
 0.900
Yod1
YOD1 deubiquitinase.
   
 0.897
Rad54l
RAD54 like (S. cerevisiae).
   
   0.895
Ncaph
non-SMC condensin I complex, subunit H.
   
 
 0.893
ENSMSIP00000026486
annotation not available
   
 
 0.888
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.