STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rph3aRabphilin 3A. (769 aa)    
Predicted Functional Partners:
Rab3a
RAB3A, member RAS oncogene family.
   
 
 0.997
Rab27a
RAB27A, member RAS oncogene family.
    
 
 0.898
Snap25
Synaptosomal-associated protein 25.
   
 
 0.867
ENSMSIP00000028271
annotation not available
    
 
 0.864
Rab3b
RAB3B, member RAS oncogene family.
   
 
 0.859
Rab3c
RAB3C, member RAS oncogene family.
   
 
 0.825
ENSMSIP00000037046
annotation not available
    
 
 0.691
Grin2a
Glutamate receptor, ionotropic, NMDA2A (epsilon 1).
   
 
 0.683
Rab3d
RAB3D, member RAS oncogene family.
   
 
 0.680
Stx1a
Syntaxin 1A (brain).
    
 
 0.620
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.