STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000012378annotation not available (603 aa)    
Predicted Functional Partners:
Fancm
Fanconi anemia, complementation group M.
    
 0.965
ENSMSIP00000015787
annotation not available
     
 0.568
ENSMSIP00000004201
annotation not available
    
 0.522
Rpa1
Replication protein A1.
    
 0.505
Lin54
Lin-54 homolog (C. elegans).
    
 0.461
Tesmin
Testis expressed metallothionein like.
    
 0.461
ENSMSIP00000002861
annotation not available
    
 0.458
ENSMSIP00000008459
annotation not available
    
 0.458
E2f4
E2F transcription factor 4.
    
 0.414
Meiob
Meiosis specific with OB domains.
    
 0.407
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.