STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
2310039H08RikRIKEN cDNA 2310039H08 gene. (114 aa)    
Predicted Functional Partners:
Pex7
Peroxisomal biogenesis factor 7.
    
   0.865
ENSMSIP00000004455
annotation not available
    
   0.788
ENSMSIP00000004822
annotation not available
    
   0.788
Phyh
phytanoyl-CoA hydroxylase.
    
   0.687
AU022252
Expressed sequence AU022252.
      
 0.616
2310011J03Rik
RIKEN cDNA 2310011J03 gene.
      
 0.604
2310022B05Rik
RIKEN cDNA 2310022B05 gene.
      
 0.596
1700037H04Rik
RIKEN cDNA 1700037H04 gene.
      
 0.592
4931406C07Rik
RIKEN cDNA 4931406C07 gene.
      
 0.544
Ecd
Ecdysoneless cell cycle regulator.
      
 0.487
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.