STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Prkrip1Prkr interacting protein 1 (IL11 inducible). (186 aa)    
Predicted Functional Partners:
Slu7
SLU7 splicing factor homolog (S. cerevisiae).
   
 0.992
Cdc40
Cell division cycle 40.
    
 0.990
Sde2
SDE2 telomere maintenance homolog (S. pombe).
    
 0.971
Nkapl
NFKB activating protein-like.
   
 0.966
Cactin
Cactin, spliceosome C complex subunit.
    
 0.965
Syf2
SYF2 homolog, RNA splicing factor (S. cerevisiae).
   
  0.959
ENSMSIP00000009551
annotation not available
    
 0.958
Ppil1
Peptidylprolyl isomerase (cyclophilin)-like 1.
    
  0.957
ENSMSIP00000004614
annotation not available
    
 0.944
ENSMSIP00000028319
annotation not available
    
 0.944
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.