Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Calr4 | Creld2 | ENSMSIP00000011730 | ENSMSIP00000025100 | Calreticulin 4. | Cysteine-rich with EGF-like domains 2. | 0.514 |
Calr4 | ENSMSIP00000018596 | ENSMSIP00000011730 | ENSMSIP00000018596 | Calreticulin 4. | annotation not available | 0.487 |
Calr4 | Mydgf | ENSMSIP00000011730 | ENSMSIP00000013965 | Calreticulin 4. | Myeloid derived growth factor. | 0.514 |
Calr4 | P4hb | ENSMSIP00000011730 | ENSMSIP00000016364 | Calreticulin 4. | Prolyl 4-hydroxylase, beta polypeptide. | 0.994 |
Calr4 | Rpn1 | ENSMSIP00000011730 | ENSMSIP00000015820 | Calreticulin 4. | Ribophorin I. | 0.562 |
Calr4 | Sdf2l1 | ENSMSIP00000011730 | ENSMSIP00000021151 | Calreticulin 4. | Stromal cell-derived factor 2-like 1. | 0.551 |
Calr4 | Xbp1 | ENSMSIP00000011730 | ENSMSIP00000022043 | Calreticulin 4. | X-box binding protein 1. | 0.610 |
Cope | ENSMSIP00000018596 | ENSMSIP00000038471 | ENSMSIP00000018596 | Coatomer protein complex, subunit epsilon. | annotation not available | 0.525 |
Cope | Mydgf | ENSMSIP00000038471 | ENSMSIP00000013965 | Coatomer protein complex, subunit epsilon. | Myeloid derived growth factor. | 0.849 |
Cope | P4hb | ENSMSIP00000038471 | ENSMSIP00000016364 | Coatomer protein complex, subunit epsilon. | Prolyl 4-hydroxylase, beta polypeptide. | 0.552 |
Cope | Slc35b1 | ENSMSIP00000038471 | ENSMSIP00000022961 | Coatomer protein complex, subunit epsilon. | Solute carrier family 35, member B1. | 0.608 |
Creld2 | Calr4 | ENSMSIP00000025100 | ENSMSIP00000011730 | Cysteine-rich with EGF-like domains 2. | Calreticulin 4. | 0.514 |
Creld2 | Mydgf | ENSMSIP00000025100 | ENSMSIP00000013965 | Cysteine-rich with EGF-like domains 2. | Myeloid derived growth factor. | 0.594 |
Creld2 | Rpn1 | ENSMSIP00000025100 | ENSMSIP00000015820 | Cysteine-rich with EGF-like domains 2. | Ribophorin I. | 0.605 |
Creld2 | Sdf2l1 | ENSMSIP00000025100 | ENSMSIP00000021151 | Cysteine-rich with EGF-like domains 2. | Stromal cell-derived factor 2-like 1. | 0.956 |
ENSMSIP00000018596 | Calr4 | ENSMSIP00000018596 | ENSMSIP00000011730 | annotation not available | Calreticulin 4. | 0.487 |
ENSMSIP00000018596 | Cope | ENSMSIP00000018596 | ENSMSIP00000038471 | annotation not available | Coatomer protein complex, subunit epsilon. | 0.525 |
ENSMSIP00000018596 | Mydgf | ENSMSIP00000018596 | ENSMSIP00000013965 | annotation not available | Myeloid derived growth factor. | 0.523 |
ENSMSIP00000018596 | Rpn1 | ENSMSIP00000018596 | ENSMSIP00000015820 | annotation not available | Ribophorin I. | 0.948 |
ENSMSIP00000018596 | Xbp1 | ENSMSIP00000018596 | ENSMSIP00000022043 | annotation not available | X-box binding protein 1. | 0.867 |
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