STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MydgfMyeloid derived growth factor. (166 aa)    
Predicted Functional Partners:
Cope
Coatomer protein complex, subunit epsilon.
   
  
 0.849
Slc35b1
Solute carrier family 35, member B1.
   
    0.773
Sdf2l1
Stromal cell-derived factor 2-like 1.
   
  
 0.678
Yars
tyrosyl-tRNA synthetase.
   
    0.596
Creld2
Cysteine-rich with EGF-like domains 2.
   
  
 0.594
Xbp1
X-box binding protein 1.
   
 
  0.574
P4hb
Prolyl 4-hydroxylase, beta polypeptide.
   
  
 0.564
ENSMSIP00000018596
annotation not available
   
    0.523
Calr4
Calreticulin 4.
   
   0.514
Rpn1
Ribophorin I.
   
    0.514
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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