STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cdh13Cadherin 13. (730 aa)    
Predicted Functional Partners:
Adipoq
Adiponectin, C1Q and collagen domain containing.
   
 
 0.975
Ctnnb1
Catenin (cadherin associated protein), beta 1.
    
 0.954
Cdh9
Cadherin 9.
     
0.924
Cdh8
Cadherin 8.
     
0.924
Cdh12
Cadherin 12.
     
0.919
Jup
Junction plakoglobin.
    
 0.918
ENSMSIP00000003572
annotation not available
    
 0.901
ENSMSIP00000003145
annotation not available
     
 0.897
ENSMSIP00000011009
annotation not available
     
0.897
Cdh3
Cadherin 3.
     
0.896
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.