Rhbdd2 protein (Mus spicilegus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

Rhbdd2

Rhomboid domain containing 2. (402 aa)

Predicted Functional Partners:

Mre11a

0.871

ENSMSIP00000020454

0.828

ENSMSIP00000026455

0.828

Derl1

0.821

Derl2

0.779

Derl3

0.691

Spata5

0.672

ENSMSIP00000024040

0.672

ENSMSIP00000037867

0.672

Impg1

0.636

Your Current Organism:

Mus spicilegus

NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Derl1	Derl2	ENSMSIP00000019043	ENSMSIP00000028673	Der1-like domain family, member 1.	Der1-like domain family, member 2.	0.988
Derl1	Derl3	ENSMSIP00000019043	ENSMSIP00000005820	Der1-like domain family, member 1.	Der1-like domain family, member 3.	0.987
Derl1	ENSMSIP00000024040	ENSMSIP00000019043	ENSMSIP00000024040	Der1-like domain family, member 1.	annotation not available	0.986
Derl1	ENSMSIP00000037867	ENSMSIP00000019043	ENSMSIP00000037867	Der1-like domain family, member 1.	annotation not available	0.995
Derl1	Rhbdd2	ENSMSIP00000019043	ENSMSIP00000014465	Der1-like domain family, member 1.	Rhomboid domain containing 2.	0.821
Derl1	Spata5	ENSMSIP00000019043	ENSMSIP00000013447	Der1-like domain family, member 1.	Spermatogenesis associated 5.	0.986
Derl2	Derl1	ENSMSIP00000028673	ENSMSIP00000019043	Der1-like domain family, member 2.	Der1-like domain family, member 1.	0.988
Derl2	Derl3	ENSMSIP00000028673	ENSMSIP00000005820	Der1-like domain family, member 2.	Der1-like domain family, member 3.	0.952
Derl2	ENSMSIP00000024040	ENSMSIP00000028673	ENSMSIP00000024040	Der1-like domain family, member 2.	annotation not available	0.961
Derl2	ENSMSIP00000037867	ENSMSIP00000028673	ENSMSIP00000037867	Der1-like domain family, member 2.	annotation not available	0.986
Derl2	Rhbdd2	ENSMSIP00000028673	ENSMSIP00000014465	Der1-like domain family, member 2.	Rhomboid domain containing 2.	0.779
Derl2	Spata5	ENSMSIP00000028673	ENSMSIP00000013447	Der1-like domain family, member 2.	Spermatogenesis associated 5.	0.961
Derl3	Derl1	ENSMSIP00000005820	ENSMSIP00000019043	Der1-like domain family, member 3.	Der1-like domain family, member 1.	0.987
Derl3	Derl2	ENSMSIP00000005820	ENSMSIP00000028673	Der1-like domain family, member 3.	Der1-like domain family, member 2.	0.952
Derl3	ENSMSIP00000024040	ENSMSIP00000005820	ENSMSIP00000024040	Der1-like domain family, member 3.	annotation not available	0.961
Derl3	ENSMSIP00000037867	ENSMSIP00000005820	ENSMSIP00000037867	Der1-like domain family, member 3.	annotation not available	0.978
Derl3	Rhbdd2	ENSMSIP00000005820	ENSMSIP00000014465	Der1-like domain family, member 3.	Rhomboid domain containing 2.	0.691
Derl3	Spata5	ENSMSIP00000005820	ENSMSIP00000013447	Der1-like domain family, member 3.	Spermatogenesis associated 5.	0.961
ENSMSIP00000020454	Impg1	ENSMSIP00000020454	ENSMSIP00000008920	annotation not available	Interphotoreceptor matrix proteoglycan 1.	0.544
ENSMSIP00000020454	Mre11a	ENSMSIP00000020454	ENSMSIP00000019579	annotation not available	MRE11A homolog A, double strand break repair nuclease.	0.985