STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pax7Paired box 7. (505 aa)    
Predicted Functional Partners:
Timm22
Translocase of inner mitochondrial membrane 22.
    
 0.981
Timm9
Translocase of inner mitochondrial membrane 9.
   
 0.975
Timm10
Translocase of inner mitochondrial membrane 10.
   
 0.973
Pax3
Paired box 3.
  
  
 
0.929
Sdhd
Succinate dehydrogenase complex, subunit D, integral membrane protein.
    
 0.911
Myod1
Myogenic differentiation 1.
   
 
 0.845
ENSMSIP00000010104
annotation not available
   
 0.840
ENSMSIP00000019096
annotation not available
    
 0.814
Cactin
Cactin, spliceosome C complex subunit.
    
 0.814
Myf5
Myogenic factor 5.
   
 
 0.794
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.