Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ada | Adarb2 | ENSMSIP00000034308 | ENSMSIP00000014779 | Adenosine deaminase. | Adenosine deaminase, RNA-specific, B2. | 0.592 |
Ada | Gria2 | ENSMSIP00000034308 | ENSMSIP00000006185 | Adenosine deaminase. | Glutamate receptor, ionotropic, AMPA2 (alpha 2). | 0.582 |
Ada | Upf1 | ENSMSIP00000034308 | ENSMSIP00000038476 | Adenosine deaminase. | UPF1 regulator of nonsense transcripts homolog (yeast). | 0.674 |
Ada | Zgrf1 | ENSMSIP00000034308 | ENSMSIP00000033673 | Adenosine deaminase. | Zinc finger, GRF-type containing 1. | 0.528 |
Adarb2 | Ada | ENSMSIP00000014779 | ENSMSIP00000034308 | Adenosine deaminase, RNA-specific, B2. | Adenosine deaminase. | 0.592 |
Adarb2 | Alyref | ENSMSIP00000014779 | ENSMSIP00000000254 | Adenosine deaminase, RNA-specific, B2. | Aly/REF export factor. | 0.614 |
Adarb2 | Alyref2 | ENSMSIP00000014779 | ENSMSIP00000028563 | Adenosine deaminase, RNA-specific, B2. | Aly/REF export factor 2. | 0.611 |
Adarb2 | Cyfip2 | ENSMSIP00000014779 | ENSMSIP00000038636 | Adenosine deaminase, RNA-specific, B2. | Cytoplasmic FMR1 interacting protein 2. | 0.542 |
Adarb2 | Gria2 | ENSMSIP00000014779 | ENSMSIP00000006185 | Adenosine deaminase, RNA-specific, B2. | Glutamate receptor, ionotropic, AMPA2 (alpha 2). | 0.560 |
Adarb2 | Pura | ENSMSIP00000014779 | ENSMSIP00000035942 | Adenosine deaminase, RNA-specific, B2. | Purine rich element binding protein A. | 0.646 |
Adarb2 | Srsf1 | ENSMSIP00000014779 | ENSMSIP00000027150 | Adenosine deaminase, RNA-specific, B2. | Serine/arginine-rich splicing factor 1. | 0.552 |
Adarb2 | Srsf2 | ENSMSIP00000014779 | ENSMSIP00000031636 | Adenosine deaminase, RNA-specific, B2. | Serine/arginine-rich splicing factor 2. | 0.616 |
Adarb2 | Upf1 | ENSMSIP00000014779 | ENSMSIP00000038476 | Adenosine deaminase, RNA-specific, B2. | UPF1 regulator of nonsense transcripts homolog (yeast). | 0.660 |
Adarb2 | Zgrf1 | ENSMSIP00000014779 | ENSMSIP00000033673 | Adenosine deaminase, RNA-specific, B2. | Zinc finger, GRF-type containing 1. | 0.660 |
Alyref | Adarb2 | ENSMSIP00000000254 | ENSMSIP00000014779 | Aly/REF export factor. | Adenosine deaminase, RNA-specific, B2. | 0.614 |
Alyref | Alyref2 | ENSMSIP00000000254 | ENSMSIP00000028563 | Aly/REF export factor. | Aly/REF export factor 2. | 0.874 |
Alyref | Pura | ENSMSIP00000000254 | ENSMSIP00000035942 | Aly/REF export factor. | Purine rich element binding protein A. | 0.615 |
Alyref | Srsf1 | ENSMSIP00000000254 | ENSMSIP00000027150 | Aly/REF export factor. | Serine/arginine-rich splicing factor 1. | 0.982 |
Alyref | Srsf2 | ENSMSIP00000000254 | ENSMSIP00000031636 | Aly/REF export factor. | Serine/arginine-rich splicing factor 2. | 0.893 |
Alyref | Upf1 | ENSMSIP00000000254 | ENSMSIP00000038476 | Aly/REF export factor. | UPF1 regulator of nonsense transcripts homolog (yeast). | 0.988 |
page 1 of 4