STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Defb48Defensin beta 48. (87 aa)    
Predicted Functional Partners:
Defb25
Defensin beta 25.
  
  
 0.869
Defb42
Defensin beta 42.
  
  
 0.856
ENSMSIP00000001626
annotation not available
     
 0.850
ENSMSIP00000016301
annotation not available
  
  
 0.830
Defb21
Defensin beta 21.
     
 0.825
Defb43
Defensin beta 43.
     
 0.791
Defb19
Defensin beta 19.
     
 0.784
Defb18
Defensin beta 18.
  
 
 0.759
Defb36
Defensin beta 36.
     
 0.752
Spag11b
Sperm associated antigen 11B.
  
   
 0.737
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.