STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sft2d2SFT2 domain containing 2. (159 aa)    
Predicted Functional Partners:
Bloc1s6
Biogenesis of lysosomal organelles complex-1, subunit 6, pallidin.
   
    0.862
Stx5a
Syntaxin 5A.
    
 
 0.678
ENSMSIP00000026556
annotation not available
   
 
 0.665
Golt1b
Golgi transport 1B.
   
 
 0.654
ENSMSIP00000026538
annotation not available
   
 
 0.654
Nip7
NIP7, nucleolar pre-rRNA processing protein.
      
 0.538
Mfap3l
Microfibrillar-associated protein 3-like.
      
 0.530
Tbc1d22b
TBC1 domain family, member 22B.
    
 
 0.506
Cog6
Component of oligomeric golgi complex 6.
    
   0.489
ENSMSIP00000022717
annotation not available
    
 
 0.464
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.