STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
9130008F23RikRIKEN cDNA 9130008F23 gene. (179 aa)    
Predicted Functional Partners:
Ankrd7
Ankyrin repeat domain 7.
      
 0.534
Zfp420
Zinc finger protein 420.
      
 0.526
Ccdc24
Coiled-coil domain containing 24.
      
 0.517
ENSMSIP00000011420
annotation not available
      
 0.449
Yipf3
Yip1 domain family, member 3.
      
 0.449
Slc35e2
Solute carrier family 35, member E2.
      
 0.449
Zfp14
Zinc finger protein 14.
      
 0.443
ENSMSIP00000008033
annotation not available
      
 0.438
Tmem87a
Transmembrane protein 87A.
      
 0.426
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.