STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pou3f1POU domain, class 3, transcription factor 1. (449 aa)    
Predicted Functional Partners:
Sox10
SRY (sex determining region Y)-box 10.
    
 0.737
Snapc4
Small nuclear RNA activating complex, polypeptide 4.
    
  0.636
Pcf11
PCF11 cleavage and polyadenylation factor subunit.
     
 0.626
Gtf2b
General transcription factor IIB.
    
 0.608
Egr2
Early growth response 2.
    
 0.608
Zic2
Zinc finger protein of the cerebellum 2.
    
 0.590
Otx2
Orthodenticle homeobox 2.
   
 
 0.586
Taf5
TATA-box binding protein associated factor 5.
    
  0.579
Snapc3
Small nuclear RNA activating complex, polypeptide 3.
   
 
  0.574
ENSMSIP00000005634
annotation not available
    
 0.566
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.