STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Plekhf2Pleckstrin homology domain containing, family F (with FYVE domain) member 2. (249 aa)    
Predicted Functional Partners:
Smdt1
Single-pass membrane protein with aspartate rich tail 1.
     
 0.721
Chmp2a
Charged multivesicular body protein 2A.
     
 0.675
Vps36
Vacuolar protein sorting 36.
     
 0.672
ENSMSIP00000029079
annotation not available
    
 0.668
Chmp3
Charged multivesicular body protein 3.
   
 
  0.646
Micu2
Mitochondrial calcium uptake 2.
    
 0.599
Micu1
Mitochondrial calcium uptake 1.
    
 0.599
Mcu
Mitochondrial calcium uniporter.
     
 0.556
Mcub
Mitochondrial calcium uniporter dominant negative beta subunit.
     
 0.556
Nckipsd
NCK interacting protein with SH3 domain.
      
 0.538
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.