STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Syt8Synaptotagmin VIII. (395 aa)    
Predicted Functional Partners:
Ston2
Stonin 2.
    
 0.746
Itsn2
Intersectin 2.
     
 0.745
ENSMSIP00000003229
annotation not available
     
 0.727
Tnni1
Troponin I, skeletal, slow 1.
     
 0.727
Rims2
Regulating synaptic membrane exocytosis 2.
     
 0.705
ENSMSIP00000010782
annotation not available
    
 0.702
Stx2
Syntaxin 2.
    
 0.696
ENSMSIP00000017032
annotation not available
 
  
 0.694
Vamp8
Vesicle-associated membrane protein 8.
    
 0.679
ENSMSIP00000013008
annotation not available
    
 0.673
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.