STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lgals8Lectin, galactose binding, soluble 8. (316 aa)    
Predicted Functional Partners:
ENSMSIP00000022343
annotation not available
    
 
 0.953
ENSMSIP00000025259
annotation not available
    
 
 0.953
Alcam
Activated leukocyte cell adhesion molecule.
    
 
 0.843
Tax1bp1
Tax1 (human T cell leukemia virus type I) binding protein 1.
   
 
 0.782
Itga3
Integrin alpha 3.
    
 
 0.660
Itgb1
Integrin beta 1 (fibronectin receptor beta).
    
 
 0.633
Pdpn
Podoplanin.
      
 0.620
Lrsam1
Leucine rich repeat and sterile alpha motif containing 1.
      
 0.592
Lgals3
Lectin, galactose binding, soluble 3.
      
0.523
Mtor
Mechanistic target of rapamycin kinase.
      
 0.521
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.