STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Scg2Secretogranin II. (577 aa)    
Predicted Functional Partners:
Chgb
Chromogranin B.
   
  
 0.966
Chga
Chromogranin A.
   
 
 0.771
Cpe
Carboxypeptidase E.
   
  
 0.670
Scg3
Secretogranin III.
   
  
 0.650
Pcsk1n
Proprotein convertase subtilisin/kexin type 1 inhibitor.
   
  
 0.635
Scg5
Secretogranin V.
   
  
 0.623
Rln3
Relaxin 3.
  
   
 0.602
Tac1
Tachykinin 1.
   
  
 0.596
Vgf
VGF nerve growth factor inducible.
   
  
 0.594
Rab3a
RAB3A, member RAS oncogene family.
   
  
 0.579
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.