STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rrp7aRibosomal RNA processing 7 homolog A (S. cerevisiae). (280 aa)    
Predicted Functional Partners:
Nol6
Nucleolar protein family 6 (RNA-associated).
   
 0.999
Utp6
UTP6 small subunit processome component.
   
 0.999
Wdr46
WD repeat domain 46.
   
 0.999
Rcl1
RNA terminal phosphate cyclase-like 1.
   
 0.999
Krr1
KRR1, small subunit (SSU) processome component, homolog (yeast).
   
 0.999
Bysl
Bystin-like.
   
 0.999
Noc4l
NOC4 like.
   
 0.998
Utp4
UTP4 small subunit processome component.
   
 0.998
Bms1
BMS1, ribosome biogenesis factor.
   
 0.998
Utp18
UTP18 small subunit processome component.
   
 0.998
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.