STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Obsl1Obscurin-like 1. (1804 aa)    
Predicted Functional Partners:
Cul7
Cullin 7.
    
 0.993
ENSMSIP00000013402
annotation not available
    
 0.980
Fbxw8
F-box and WD-40 domain protein 8.
    
 0.957
Ttn
Titin.
   
 
0.951
Wdr18
WD repeat domain 18.
   
 0.924
Ankra2
Ankyrin repeat, family A (RFXANK-like), 2.
    
 0.904
Tex10
Testis expressed gene 10.
   
 0.891
Mylk
Myosin, light polypeptide kinase.
   
 
0.855
Tcap
Titin-cap.
   
 0.812
Ank1
Ankyrin 1, erythroid.
    
 0.792
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.