STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rad50RAD50 double strand break repair protein. (1312 aa)    
Predicted Functional Partners:
Mre11a
MRE11A homolog A, double strand break repair nuclease.
  
 0.999
Nbn
Nibrin.
   
 0.999
Atm
Ataxia telangiectasia mutated.
   
 0.994
Bard1
BRCA1 associated RING domain 1.
    
 0.994
Wrn
Werner syndrome RecQ like helicase.
  
 0.992
Brca1
Breast cancer 1, early onset.
    
 0.991
Rbbp8
Retinoblastoma binding protein 8, endonuclease.
    
 0.989
Fen1
Flap structure specific endonuclease 1.
  
 0.983
Xrcc6
X-ray repair complementing defective repair in Chinese hamster cells 6.
   
 0.978
Atr
Ataxia telangiectasia and Rad3 related.
   
 0.977
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.