STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmtk3Lemur tyrosine kinase 3. (1384 aa)    
Predicted Functional Partners:
Il34
Interleukin 34.
   
 0.656
Lrrc14
Leucine rich repeat containing 14.
    
 0.656
Wfdc18
WAP four-disulfide core domain 18.
    
 0.635
Kitl
Kit ligand.
    
 0.625
Pdgfb
Platelet derived growth factor, B polypeptide.
    
 0.587
Lrrc24
Leucine rich repeat containing 24.
    
 0.574
Csf1
Colony stimulating factor 1 (macrophage).
    
 0.566
ENSMSIP00000005875
annotation not available
    
 0.545
ENSMSIP00000033261
annotation not available
    
 0.545
Grb2
Growth factor receptor bound protein 2.
    
 0.545
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.