STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
1700012B07RikRIKEN cDNA 1700012B07 gene. (263 aa)    
Predicted Functional Partners:
Sdc1
Syndecan 1.
    
  0.581
Wfs1
Wolframin ER transmembrane glycoprotein.
     
 0.581
Sparcl1
SPARC-like 1.
     
 0.572
ENSMSIP00000010088
annotation not available
     
 0.572
ENSMSIP00000012084
annotation not available
  
  
  0.515
Wdr49
WD repeat domain 49.
   
  0.501
ENSMSIP00000022370
annotation not available
   
  0.501
Wdr95
WD40 repeat domain 95.
   
  0.501
ENSMSIP00000015573
annotation not available
  
  
  0.489
ENSMSIP00000012989
annotation not available
  
  
  0.486
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.