STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slc7a4Solute carrier family 7 (cationic amino acid transporter, y+ system), member 4. (662 aa)    
Predicted Functional Partners:
Met
Met proto-oncogene.
    
  0.740
Mst1r
Macrophage stimulating 1 receptor (c-met-related tyrosine kinase).
    
  0.740
Slc3a1
Solute carrier family 3, member 1.
   
 0.615
Slc3a2
Solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2.
   
 0.571
ENSMSIP00000009587
annotation not available
   
 0.549
6430548M08Rik
RIKEN cDNA 6430548M08 gene.
   
 0.549
Ppil4
Peptidylprolyl isomerase (cyclophilin)-like 4.
   
  
 0.529
Nudt12
Nudix (nucleoside diphosphate linked moiety X)-type motif 12.
   
 0.517
Amy1
Amylase 1, salivary.
    
 0.509
ENSMSIP00000005221
annotation not available
    
 0.509
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.