STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ddx41DEAD (Asp-Glu-Ala-Asp) box polypeptide 41. (633 aa)    
Predicted Functional Partners:
ENSMSIP00000022440
annotation not available
    
 0.979
Nkapl
NFKB activating protein-like.
    
  0.935
Cdc40
Cell division cycle 40.
    
 0.929
Srrm1
Serine/arginine repetitive matrix 1.
    
  0.926
Alyref
Aly/REF export factor.
   
  0.921
Ppwd1
Peptidylprolyl isomerase domain and WD repeat containing 1.
   
 0.872
ENSMSIP00000015013
annotation not available
    
   0.867
Tbk1
TANK-binding kinase 1.
    
 0.818
Dhx36
DEAH (Asp-Glu-Ala-His) box polypeptide 36.
    
 0.795
Dhx9
DEAH (Asp-Glu-Ala-His) box polypeptide 9.
    
 0.793
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.