STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fam221bFamily with sequence similarity 221, member B. (515 aa)    
Predicted Functional Partners:
Atg13
Autophagy related 13.
    
   0.683
Tmem202
Transmembrane protein 202.
      
 0.594
Atg101
Autophagy related 101.
    
   0.571
ENSMSIP00000022855
annotation not available
      
 0.520
Spaar
Small regulatory polypeptide of amino acid response.
      
 0.515
Fndc8
Fibronectin type III domain containing 8.
   
  
 0.511
Bpifa3
BPI fold containing family A, member 3.
      
 0.449
Spag8
Sperm associated antigen 8.
      
 0.449
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.