STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ClockCircadian locomotor output cycles kaput. (859 aa)    
Predicted Functional Partners:
Cry2
Cryptochrome 2 (photolyase-like).
    
 0.999
Arntl
Aryl hydrocarbon receptor nuclear translocator-like.
   
0.999
Cry1
Cryptochrome 1 (photolyase-like).
    
 0.999
Per2
Period circadian clock 2.
    
0.998
Arntl2
Aryl hydrocarbon receptor nuclear translocator-like 2.
   
0.997
Csnk1e
Casein kinase 1, epsilon.
    
 0.993
Per1
Period circadian clock 1.
    
0.993
Per3
Period circadian clock 3.
    
0.993
ENSMSIP00000018561
annotation not available
    
 0.987
Cipc
CLOCK interacting protein, circadian.
    
 
 0.984
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.