STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pax5Paired box 5. (390 aa)    
Predicted Functional Partners:
Ets1
E26 avian leukemia oncogene 1, 5' domain.
   
 
 0.974
ENSMSIP00000013969
annotation not available
    
 
 0.871
Ets2
E26 avian leukemia oncogene 2, 3' domain.
   
 
 0.864
Runx1
Runt related transcription factor 1.
    
 0.845
Ebf1
Early B cell factor 1.
   
  
 0.772
Ikzf1
IKAROS family zinc finger 1.
   
  
 0.767
Cd19
CD19 antigen.
   
  
 0.732
Prdm1
PR domain containing 1, with ZNF domain.
      
 0.732
Runx3
Runt related transcription factor 3.
    
 0.730
Cd79a
CD79A antigen (immunoglobulin-associated alpha).
   
  
 0.723
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.