STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cfdp1Craniofacial development protein 1. (295 aa)    
Predicted Functional Partners:
Ruvbl1
RuvB-like protein 1.
   
 0.994
Dmap1
DNA methyltransferase 1-associated protein 1.
   
 0.993
ENSMSIP00000002142
annotation not available
    
 0.988
ENSMSIP00000020664
annotation not available
    
 0.988
ENSMSIP00000022913
annotation not available
    
 0.988
H2az2
H2A.Z histone variant 2.
    
 0.988
Ep400
E1A binding protein p400.
    
 0.986
Yeats4
YEATS domain containing 4.
   
 0.986
ENSMSIP00000030864
annotation not available
    
 0.986
Znhit1
Zinc finger, HIT domain containing 1.
    
 0.984
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.