STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lgals12Lectin, galactose binding, soluble 12. (314 aa)    
Predicted Functional Partners:
ENSMSIP00000022343
annotation not available
    
 
 0.864
ENSMSIP00000025259
annotation not available
    
 
 0.864
Tax1bp1
Tax1 (human T cell leukemia virus type I) binding protein 1.
   
 
 0.606
Mindy3
MINDY lysine 48 deubiquitinase 3.
      
 0.539
Lgals2
Lectin, galactose-binding, soluble 2.
      
 0.531
ENSMSIP00000014334
annotation not available
    
 
 0.529
Ankef1
Ankyrin repeat and EF-hand domain containing 1.
   
  
 0.503
Vps13c
Vacuolar protein sorting 13C.
   
 
 0.492
Timp4
Tissue inhibitor of metalloproteinase 4.
   
  
 0.480
Fam20a
Family with sequence similarity 20, member A.
    
 0.456
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.