STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Celsr1Cadherin, EGF LAG seven-pass G-type receptor 1. (3004 aa)    
Predicted Functional Partners:
Vangl2
VANGL planar cell polarity 2.
    
 0.838
Fzd6
Frizzled class receptor 6.
    
 0.750
Fzd3
Frizzled class receptor 3.
    
 0.742
Prickle1
Prickle planar cell polarity protein 1.
   
 0.718
Dvl2
Dishevelled segment polarity protein 2.
     
 0.703
Prickle3
Prickle planar cell polarity protein 3.
   
 0.681
Prickle2
Prickle planar cell polarity protein 2.
   
 0.680
ENSMSIP00000038105
annotation not available
   
 0.677
Fzd9
Frizzled class receptor 9.
    
 0.663
Daam1
Dishevelled associated activator of morphogenesis 1.
    
 0.650
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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