STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpt1cCarnitine palmitoyltransferase 1c. (798 aa)    
Predicted Functional Partners:
ENSMSIP00000037583
annotation not available
     
 0.953
Cpt2
Carnitine palmitoyltransferase 2.
  
 
0.944
Abhd6
Abhydrolase domain containing 6.
     
 0.939
Sacm1l
SAC1 suppressor of actin mutations 1-like (yeast).
     
 0.936
Gria4
Glutamate receptor, ionotropic, AMPA4 (alpha 4).
     
 0.930
Gria2
Glutamate receptor, ionotropic, AMPA2 (alpha 2).
     
 0.930
Cpt1a
Carnitine palmitoyltransferase 1a, liver.
  
  
 
0.930
Gria3
Glutamate receptor, ionotropic, AMPA3 (alpha 3).
     
 0.930
Abhd12
Abhydrolase domain containing 12.
     
 0.929
Acacb
acetyl-Coenzyme A carboxylase beta.
     
 0.928
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.