STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Efcab1EF-hand calcium binding domain 1. (212 aa)    
Predicted Functional Partners:
Ttc25
Tetratricopeptide repeat domain 25.
    
 0.932
Ccdc151
Coiled-coil domain containing 151.
    
 0.930
ENSMSIP00000029909
annotation not available
  
 0.929
ENSMSIP00000023831
annotation not available
    
 
 0.911
ENSMSIP00000031524
annotation not available
    
 0.909
ENSMSIP00000037621
annotation not available
    
 0.901
ENSMSIP00000037640
annotation not available
    
 0.901
Efhc2
EF-hand domain (C-terminal) containing 2.
   
 
 0.899
Armc3
Armadillo repeat containing 3.
   
 0.886
Morn5
MORN repeat containing 5.
   
   0.884
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.