STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Abcc1ATP-binding cassette, sub-family C (CFTR/MRP), member 1. (1528 aa)    
Predicted Functional Partners:
Abcg2
ATP binding cassette subfamily G member 2 (Junior blood group).
   
 0.833
Abca2
ATP-binding cassette, sub-family A (ABC1), member 2.
   
0.699
ENSMSIP00000022070
annotation not available
  
 0.681
Gopc
Golgi associated PDZ and coiled-coil motif containing.
   
 0.647
Abcg1
ATP binding cassette subfamily G member 1.
   
 0.640
Usp10
Ubiquitin specific peptidase 10.
    
  0.629
Abcg4
ATP binding cassette subfamily G member 4.
   
 0.617
Rapgef4
Rap guanine nucleotide exchange factor (GEF) 4.
    
 0.606
Med14
Mediator complex subunit 14.
    
 0.599
Kcnj8
Potassium inwardly-rectifying channel, subfamily J, member 8.
    
 0.597
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.