STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMSIP00000025105annotation not available (325 aa)    
Predicted Functional Partners:
Prpf3
pre-mRNA processing factor 3.
   
 0.989
Prpf31
pre-mRNA processing factor 31.
   
 0.987
Eftud2
Elongation factor Tu GTP binding domain containing 2.
   
 0.987
Prpf6
pre-mRNA splicing factor 6.
   
 0.986
Snrnp200
Small nuclear ribonucleoprotein 200 (U5).
   
 0.986
Prpf8
pre-mRNA processing factor 8.
   
 0.986
Sf3b4
Splicing factor 3b, subunit 4.
    
 0.985
Sf3b3
Splicing factor 3b, subunit 3.
   
 0.985
ENSMSIP00000032575
annotation not available
   
 0.985
Sart1
Squamous cell carcinoma antigen recognized by T cells 1.
    
 0.984
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.