STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppp1cbProtein phosphatase 1 catalytic subunit beta. (359 aa)    
Predicted Functional Partners:
Ppp1r12a
Protein phosphatase 1, regulatory subunit 12A.
   
 0.996
Ppp1r12b
Protein phosphatase 1, regulatory subunit 12B.
   
 0.995
Ppp1r12c
Protein phosphatase 1, regulatory subunit 12C.
   
 0.994
Wdr82
WD repeat domain containing 82.
    
 0.987
Ppp1r15b
Protein phosphatase 1, regulatory subunit 15B.
    
 0.987
Eif2s1
Eukaryotic translation initiation factor 2, subunit 1 alpha.
   
 0.986
Rb1
RB transcriptional corepressor 1.
   
 0.985
ENSMSIP00000019357
annotation not available
   
 0.985
Ppp1r15a
Protein phosphatase 1, regulatory subunit 15A.
    
 0.985
Ppp1ca
Protein phosphatase 1 catalytic subunit alpha.
  
0.984
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.