STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Vps26bVPS26 retromer complex component B. (336 aa)    
Predicted Functional Partners:
Vps29
VPS29 retromer complex component.
   
 0.999
Vps35
VPS35 retromer complex component.
   
 0.999
Snx27
Sorting nexin family member 27.
   
 0.996
Snx1
Sorting nexin 1.
   
 0.994
Snx2
Sorting nexin 2.
   
 0.993
Tbc1d5
TBC1 domain family, member 5.
   
 0.993
ENSMSIP00000036468
annotation not available
   
 0.993
Vps26a
VPS26 retromer complex component A.
  
 
0.992
Snx8
Sorting nexin 8.
    
 0.979
Snx10
Sorting nexin 10.
    
 0.975
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.