STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acer1Alkaline ceramidase 1. (273 aa)    
Predicted Functional Partners:
Asah2
N-acylsphingosine amidohydrolase 2.
    
 0.982
Asah1
N-acylsphingosine amidohydrolase 1.
     
 0.976
Cers2
Ceramide synthase 2.
    
 0.971
Cers6
Ceramide synthase 6.
    
 0.971
Cers3
Ceramide synthase 3.
    
 0.971
Cers5
Ceramide synthase 5.
    
 0.970
Sphk2
Sphingosine kinase 2.
    
 0.967
Cerk
Ceramide kinase.
    
 0.967
Smpd2
Sphingomyelin phosphodiesterase 2, neutral.
    
 0.967
Ugcg
UDP-glucose ceramide glucosyltransferase.
     
 0.966
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.