STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zc3hc1Zinc finger, C3HC type 1. (501 aa)    
Predicted Functional Partners:
Skp1a
S-phase kinase-associated protein 1A.
    
 0.916
Gpn1
GPN-loop GTPase 1.
   
    0.875
Rbx1
Ring-box 1.
    
 0.753
Cul1
Cullin 1.
    
  0.686
Gart
Phosphoribosylglycinamide formyltransferase.
   
    0.606
Wrn
Werner syndrome RecQ like helicase.
      
 0.592
Mettl2
Methyltransferase like 2.
   
    0.579
Trappc12
Trafficking protein particle complex 12.
      
 0.546
Cul3
Cullin 3.
    
  0.542
Adcy7
Adenylate cyclase 7.
      
 0.523
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.