STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Defb11Defensin beta 11. (77 aa)    
Predicted Functional Partners:
Defb14
Defensin beta 14.
     
 0.884
Defb1
Defensin beta 1.
     
0.854
Defb40
Defensin beta 40.
     
 0.851
Defb38
Defensin beta 38.
     
 0.801
Defb13
Defensin beta 13.
      
 0.615
Defb50
Defensin beta 50.
      
 0.599
Defb37
Defensin beta 37.
      
 0.596
Defb33
Defensin beta 33.
      
 0.562
Ins2
Insulin II.
      
 0.544
Gip
Gastric inhibitory polypeptide.
      
 0.544
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.