STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slc35c2Solute carrier family 35, member C2. (364 aa)    
Predicted Functional Partners:
Col20a1
Collagen, type XX, alpha 1.
 
      0.696
Slc35c1
Solute carrier family 35, member C1.
   
  
 0.624
Slc35a5
Solute carrier family 35, member A5.
   
  
 0.623
Slc35b3
Solute carrier family 35, member B3.
      
 0.613
Xpnpep2
X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound.
    
 0.598
Xpnpep1
X-prolyl aminopeptidase (aminopeptidase P) 1, soluble.
    
 0.598
Slc35a4
Solute carrier family 35, member A4.
   
  
 0.597
Slc35d1
annotation not available
   
  
 0.596
Fastkd3
FAST kinase domains 3.
  
 
 0.592
Slc35b4
Solute carrier family 35, member B4.
      
 0.585
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.