STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Spats2lSpermatogenesis associated, serine-rich 2-like. (578 aa)    
Predicted Functional Partners:
ENSMSIP00000000020
annotation not available
      
 0.535
Ttc22
Tetratricopeptide repeat domain 22.
      
 0.534
Chtf8
CTF8, chromosome transmission fidelity factor 8.
      
 0.524
Mindy4
MINDY lysine 48 deubiquitinase 4.
      
 0.497
Fat2
FAT atypical cadherin 2.
      
 0.493
Rtp4
Receptor transporter protein 4.
      
 0.483
Vps35l
VPS35 endosomal protein sorting factor like.
      
 0.470
Ppp1r42
Protein phosphatase 1, regulatory subunit 42.
      
 0.470
Ascl5
Achaete-scute family bHLH transcription factor 5.
      
 0.470
Tmem51
Transmembrane protein 51.
      
 0.459
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.